Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 MIR3917-201ENST00000580971 93 ntBASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC092053.1-201ENST00000605787 1936 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 LINC02199-201ENST00000506655 2702 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC092171.3-201ENST00000610122 2651 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC005104.2-201ENST00000427818 678 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC012618.2-201ENST00000428058 849 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AL390955.1-201ENST00000428694 934 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 PVRIG2P-201ENST00000435460 978 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 CCR12P-201ENST00000446203 998 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC113404.2-201ENST00000507884 177 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AP003071.4-201ENST00000562276 1284 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 AC027348.2-201ENST00000624375 642 ntBASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
KRTAP3-1Q9BYR8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms