Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-3Q9BYR6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 EGFEM1P-202ENST00000431685 1563 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC137767.1-201ENST00000602918 1920 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 SLC25A51-201ENST00000242275 1130 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 RPL5P19-201ENST00000404228 893 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 USP9YP33-201ENST00000412220 421 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 KIF4CP-201ENST00000422742 1279 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC097721.1-201ENST00000427150 1253 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 LONRF2P2-201ENST00000439212 571 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC112653.1-201ENST00000443851 386 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC130895.1-201ENST00000549373 493 ntTSL 5 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC079322.1-201ENST00000568345 1135 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC064805.1-201ENST00000581412 529 ntTSL 4 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC010680.3-201ENST00000604215 520 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC112220.3-201ENST00000605502 502 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AL442067.1-201ENST00000613261 223 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC100793.4-201ENST00000613683 429 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC026368.1-201ENST00000614934 690 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC002550.2-201ENST00000621246 394 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC004232.3-201ENST00000622977 525 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 CR392000.1-201ENST00000624770 1228 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AC092447.7-201ENST00000422212 1621 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 KYNUP3-201ENST00000574386 1341 ntBASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-3Q9BYR6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 WWC2-AS2-201ENST00000578387 2183 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AL133343.1-201ENST00000375670 846 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AIPL1-203ENST00000381129 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 FABP7P1-201ENST00000424004 391 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 LINC01324-202ENST00000497379 838 ntTSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AC074134.1-201ENST00000503901 1108 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 ASS1P8-201ENST00000504437 647 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 CDC42P4-201ENST00000510507 563 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 RNU6-507P-201ENST00000516045 100 ntBASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC11.07□□□□□ -0.64
KRTAP3-3Q9BYR6 OR5AK3P-201ENST00000527486 1297 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms