Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LIMD2Q9BT23 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 ATP5G1P1-201ENST00000448724 379 ntBASIC10.56□□□□□ -0.72
LIMD2Q9BT23 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 MNT-208ENST00000575394 606 ntTSL 4 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 AC010240.3-201ENST00000607688 395 ntBASIC10.56□□□□□ -0.72
LIMD2Q9BT23 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC10.56□□□□□ -0.72
LIMD2Q9BT23 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 GATB-213ENST00000515812 1893 ntTSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 LINC01568-207ENST00000641790 1380 ntBASIC10.55□□□□□ -0.72
LIMD2Q9BT23 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 FLJ13224-201ENST00000313737 1514 ntBASIC10.55□□□□□ -0.72
LIMD2Q9BT23 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LIMD2Q9BT23 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms