Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 AC246785.2-201ENST00000432512 513 ntBASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 AC010460.3-201ENST00000511359 1579 ntBASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 AC116407.4-201ENST00000623319 1061 ntBASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.49■□□□□ 0.23
MS4A4EQ96PG1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 AL023806.1-201ENST00000603994 1649 ntBASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 AC139713.2-201ENST00000641328 2723 ntBASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 PCED1CP-201ENST00000419887 785 ntBASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 AL845331.1-201ENST00000424978 1190 ntBASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 IER3-202ENST00000376377 1350 ntBASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MS4A4EQ96PG1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 AC141586.5-201ENST00000624546 2050 ntBASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 AC125634.1-201ENST00000438758 1403 ntBASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 COX5BP2-201ENST00000392354 334 ntBASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 AC007967.3-201ENST00000434308 558 ntBASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 AC002558.1-201ENST00000488906 803 ntBASIC16.47■□□□□ 0.23
MS4A4EQ96PG1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms