Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 KRT18P2-201ENST00000447938 1258 ntBASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 AC122714.2-201ENST00000502787 707 ntBASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 AL596442.2-201ENST00000610240 980 ntBASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC46A1Q96NT5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 AC096633.1-201ENST00000422446 749 ntBASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 YBX1P5-201ENST00000509441 847 ntBASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 ABALON-201ENST00000629058 1903 ntBASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 SIGLEC16-201ENST00000599858 1437 ntBASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 AC135050.7-201ENST00000624508 2218 ntBASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC46A1Q96NT5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 AL096828.2-201ENST00000567259 1965 ntBASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC46A1Q96NT5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC46A1Q96NT5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SLC46A1Q96NT5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SLC46A1Q96NT5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC46A1Q96NT5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC46A1Q96NT5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC46A1Q96NT5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC46A1Q96NT5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms