Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CALR3Q96L12 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 AL118508.1-201ENST00000613502 2345 ntBASIC18.71■□□□□ 0.59
CALR3Q96L12 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
CALR3Q96L12 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CALR3Q96L12 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 FAM8A6P-201ENST00000407496 1135 ntBASIC18.71■□□□□ 0.59
CALR3Q96L12 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CALR3Q96L12 HLA-F-220ENST00000434407 884 ntBASIC18.71■□□□□ 0.59
CALR3Q96L12 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.71■□□□□ 0.59
CALR3Q96L12 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.71■□□□□ 0.59
CALR3Q96L12 AC140113.3-201ENST00000605663 199 ntBASIC18.71■□□□□ 0.59
CALR3Q96L12 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CALR3Q96L12 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 LINC01311-201ENST00000565162 1445 ntBASIC18.71■□□□□ 0.59
CALR3Q96L12 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.71■□□□□ 0.59
CALR3Q96L12 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.71■□□□□ 0.59
CALR3Q96L12 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.58
CALR3Q96L12 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.7■□□□□ 0.58
CALR3Q96L12 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.7■□□□□ 0.58
CALR3Q96L12 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CALR3Q96L12 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.7■□□□□ 0.58
CALR3Q96L12 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.7■□□□□ 0.58
CALR3Q96L12 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.7■□□□□ 0.58
CALR3Q96L12 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.7■□□□□ 0.58
CALR3Q96L12 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.7■□□□□ 0.58
CALR3Q96L12 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.7■□□□□ 0.58
CALR3Q96L12 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CALR3Q96L12 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.7■□□□□ 0.58
CALR3Q96L12 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CALR3Q96L12 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.7■□□□□ 0.58
CALR3Q96L12 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CALR3Q96L12 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CALR3Q96L12 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.69■□□□□ 0.58
CALR3Q96L12 AC096633.1-201ENST00000422446 749 ntBASIC18.69■□□□□ 0.58
CALR3Q96L12 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.69■□□□□ 0.58
CALR3Q96L12 TSPY15P-201ENST00000457163 923 ntBASIC18.69■□□□□ 0.58
CALR3Q96L12 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.69■□□□□ 0.58
CALR3Q96L12 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CALR3Q96L12 AC145285.6-201ENST00000604632 637 ntBASIC18.69■□□□□ 0.58
CALR3Q96L12 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CALR3Q96L12 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.69■□□□□ 0.58
CALR3Q96L12 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.69■□□□□ 0.58
CALR3Q96L12 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CALR3Q96L12 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CALR3Q96L12 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CALR3Q96L12 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.69■□□□□ 0.58
CALR3Q96L12 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.69■□□□□ 0.58
CALR3Q96L12 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.69■□□□□ 0.58
CALR3Q96L12 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.69■□□□□ 0.58
CALR3Q96L12 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CALR3Q96L12 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CALR3Q96L12 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CALR3Q96L12 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.68■□□□□ 0.58
CALR3Q96L12 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms