Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 FAM220CP-201ENST00000395253 831 ntBASIC18.71■□□□□ 0.59
UBA3Q8TBC4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 MIR5100-201ENST00000579544 119 ntBASIC18.71■□□□□ 0.59
UBA3Q8TBC4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
UBA3Q8TBC4 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.71■□□□□ 0.58
UBA3Q8TBC4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 INTS4P1-201ENST00000438455 1935 ntBASIC18.7■□□□□ 0.58
UBA3Q8TBC4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 AL732292.2-201ENST00000609649 430 ntBASIC18.7■□□□□ 0.58
UBA3Q8TBC4 AC114341.1-201ENST00000618070 349 ntBASIC18.7■□□□□ 0.58
UBA3Q8TBC4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBA3Q8TBC4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 LINC00304-203ENST00000565008 1864 ntBASIC18.69■□□□□ 0.58
UBA3Q8TBC4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.69■□□□□ 0.58
UBA3Q8TBC4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 LINC00896-202ENST00000609602 2128 ntBASIC18.68■□□□□ 0.58
UBA3Q8TBC4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 AL591684.3-201ENST00000605187 298 ntBASIC18.68■□□□□ 0.58
UBA3Q8TBC4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.68■□□□□ 0.58
UBA3Q8TBC4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms