Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 KRT89P-201ENST00000620027 1478 ntBASIC18.36■□□□□ 0.53
CCDC89Q8N998 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 REXO1L11P-201ENST00000620964 1927 ntBASIC18.35■□□□□ 0.53
CCDC89Q8N998 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 ATP5G1P1-201ENST00000448724 379 ntBASIC18.35■□□□□ 0.53
CCDC89Q8N998 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC89Q8N998 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC89Q8N998 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 SLC25A3P1-201ENST00000443844 931 ntBASIC18.34■□□□□ 0.53
CCDC89Q8N998 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 AL136038.4-201ENST00000603606 1261 ntBASIC18.34■□□□□ 0.53
CCDC89Q8N998 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 AL031432.5-201ENST00000641059 760 ntBASIC18.34■□□□□ 0.53
CCDC89Q8N998 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC89Q8N998 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 AC084018.2-201ENST00000613093 2607 ntBASIC18.34■□□□□ 0.53
CCDC89Q8N998 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC89Q8N998 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC89Q8N998 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CCDC89Q8N998 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC89Q8N998 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CCDC89Q8N998 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC89Q8N998 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC89Q8N998 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCDC89Q8N998 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC89Q8N998 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC89Q8N998 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.33■□□□□ 0.52
CCDC89Q8N998 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC89Q8N998 AC087499.1-201ENST00000418141 1075 ntBASIC18.33■□□□□ 0.52
CCDC89Q8N998 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC89Q8N998 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC89Q8N998 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC89Q8N998 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC89Q8N998 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC89Q8N998 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC89Q8N998 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC89Q8N998 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC89Q8N998 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms