Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC092338.2-201ENST00000568827 1415 ntBASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 AL023803.3-201ENST00000615559 522 ntBASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.68■□□□□ 0.42
CRLF3Q8IUI8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 LINC00304-203ENST00000565008 1864 ntBASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 CA15P1-201ENST00000481698 905 ntBASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 AC010653.2-201ENST00000623505 997 ntBASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 HLA-J-201ENST00000462773 1622 ntBASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRLF3Q8IUI8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 AC104076.2-201ENST00000448912 469 ntBASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 AL353719.1-201ENST00000566847 864 ntBASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 AL445228.2-201ENST00000605589 952 ntBASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CRLF3Q8IUI8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRLF3Q8IUI8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms