Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AC109462.3-201ENST00000573934 613 ntBASIC18.5■□□□□ 0.55
CCDC149Q6ZUS6 MIR4469-201ENST00000583919 79 ntBASIC18.5■□□□□ 0.55
CCDC149Q6ZUS6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC149Q6ZUS6 AC019129.2-201ENST00000609837 1235 ntBASIC18.5■□□□□ 0.55
CCDC149Q6ZUS6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC149Q6ZUS6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC149Q6ZUS6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC149Q6ZUS6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC149Q6ZUS6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 ELK2BP-201ENST00000415014 1224 ntBASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 AC254562.1-201ENST00000417586 456 ntBASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 ALG1L5P-201ENST00000482043 771 ntBASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 WIZP1-201ENST00000531444 2299 ntBASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 AC148477.5-201ENST00000625164 1645 ntBASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC149Q6ZUS6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 CYMP-203ENST00000474680 1263 ntBASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 STK19B-204ENST00000512515 211 ntBASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 MIR4751-201ENST00000578027 74 ntBASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC149Q6ZUS6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 AC006504.4-201ENST00000592118 1568 ntBASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 RFPL4AP1-201ENST00000530883 850 ntBASIC18.47■□□□□ 0.55
CCDC149Q6ZUS6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms