Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 LINC00304-203ENST00000565008 1864 ntBASIC16.11■□□□□ 0.17
NIPAL3Q6P499 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NIPAL3Q6P499 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 AL645929.1-201ENST00000420084 975 ntBASIC16.1■□□□□ 0.17
NIPAL3Q6P499 SPDYE13P-201ENST00000445314 798 ntBASIC16.1■□□□□ 0.17
NIPAL3Q6P499 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NIPAL3Q6P499 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 KRT18P35-201ENST00000510488 1269 ntBASIC16.09■□□□□ 0.17
NIPAL3Q6P499 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 AC022898.2-201ENST00000616822 1312 ntBASIC16.09■□□□□ 0.17
NIPAL3Q6P499 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.09■□□□□ 0.17
NIPAL3Q6P499 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.09■□□□□ 0.17
NIPAL3Q6P499 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms