Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ZNF544Q6NX49 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 HOMER2P1-201ENST00000455653 964 ntBASIC16.29■□□□□ 0.2
ZNF544Q6NX49 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 AC140113.3-201ENST00000605663 199 ntBASIC16.29■□□□□ 0.2
ZNF544Q6NX49 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF544Q6NX49 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 KRT18P41-201ENST00000518924 1277 ntBASIC16.28■□□□□ 0.2
ZNF544Q6NX49 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
ZNF544Q6NX49 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.27■□□□□ 0.2
ZNF544Q6NX49 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 AC138028.4-201ENST00000564984 1845 ntBASIC16.27■□□□□ 0.2
ZNF544Q6NX49 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.27■□□□□ 0.2
ZNF544Q6NX49 NEK4P2-201ENST00000580004 1012 ntBASIC16.27■□□□□ 0.2
ZNF544Q6NX49 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms