Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 AC117947.1-201ENST00000427448 529 ntBASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 BX664615.1-201ENST00000443558 458 ntBASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 ATP5G1P1-201ENST00000448724 379 ntBASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 ZNF444P1-201ENST00000559497 298 ntBASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 AL390719.2-201ENST00000606993 987 ntBASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 HYMAI.1-201ENST00000620949 238 ntBASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKAL1Q5VV42 LINC02012-201ENST00000608206 1725 ntBASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 COX5BP2-201ENST00000392354 334 ntBASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 TNRC18P3-201ENST00000441896 2691 ntBASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDKAL1Q5VV42 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 VENTXP5-201ENST00000523979 775 ntBASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 AC005332.3-201ENST00000589904 676 ntBASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 AC097493.4-201ENST00000641197 219 ntBASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDKAL1Q5VV42 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKAL1Q5VV42 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKAL1Q5VV42 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKAL1Q5VV42 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKAL1Q5VV42 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDKAL1Q5VV42 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms