Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CDC42BPAQ5VT25 AC046185.3-201ENST00000623228 1824 ntBASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 KRT18P55-202ENST00000578578 1546 ntBASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 PI4KAP1-204ENST00000612579 1703 ntBASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CDC42BPAQ5VT25 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPAQ5VT25 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPAQ5VT25 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPAQ5VT25 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC26.45■■□□□ 1.83
CDC42BPAQ5VT25 KRT8P48-201ENST00000515599 1220 ntBASIC26.45■■□□□ 1.83
CDC42BPAQ5VT25 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPAQ5VT25 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPAQ5VT25 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPAQ5VT25 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CDC42BPAQ5VT25 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
CDC42BPAQ5VT25 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
CDC42BPAQ5VT25 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CDC42BPAQ5VT25 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
CDC42BPAQ5VT25 AC112191.1-201ENST00000523689 701 ntBASIC26.45■■□□□ 1.82
CDC42BPAQ5VT25 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC26.45■■□□□ 1.82
CDC42BPAQ5VT25 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC26.45■■□□□ 1.82
CDC42BPAQ5VT25 TK1-204ENST00000590430 683 ntTSL 3 BASIC26.45■■□□□ 1.82
CDC42BPAQ5VT25 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 MNT-208ENST00000575394 606 ntTSL 4 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC26.44■■□□□ 1.82
CDC42BPAQ5VT25 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 BSG-215ENST00000618006 1329 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 HARS-203ENST00000431330 1774 ntTSL 2 BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
CDC42BPAQ5VT25 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 KRT18P32-201ENST00000424695 1287 ntBASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 AL390955.2-201ENST00000603032 514 ntBASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 AC004835.2-201ENST00000603762 682 ntBASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 Z92544.3-201ENST00000624747 417 ntBASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 FLJ13224-201ENST00000313737 1514 ntBASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 KLK8-202ENST00000320838 456 ntTSL 5 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 AL135744.1-201ENST00000565098 629 ntBASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CDC42BPAQ5VT25 STK4-201ENST00000372801 2038 ntTSL 2 BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CDC42BPAQ5VT25 AL121761.2-201ENST00000598007 1648 ntBASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms