Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 AP000842.3-202ENST00000569238 1080 ntBASIC9.53□□□□□ -0.88
UBR4Q5T4S7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 AL049757.1-201ENST00000616842 1596 ntBASIC9.53□□□□□ -0.88
UBR4Q5T4S7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 BTNL10-201ENST00000595971 695 ntBASIC9.53□□□□□ -0.88
UBR4Q5T4S7 FEM1AP3-201ENST00000403722 1741 ntBASIC9.53□□□□□ -0.88
UBR4Q5T4S7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
UBR4Q5T4S7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 RN7SL769P-201ENST00000469386 295 ntBASIC9.52□□□□□ -0.89
UBR4Q5T4S7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC9.52□□□□□ -0.89
UBR4Q5T4S7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 AC010460.3-201ENST00000511359 1579 ntBASIC9.52□□□□□ -0.89
UBR4Q5T4S7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 MIR149-201ENST00000384879 89 ntBASIC9.52□□□□□ -0.89
UBR4Q5T4S7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 AL353622.2-201ENST00000605846 425 ntBASIC9.52□□□□□ -0.89
UBR4Q5T4S7 AL365330.1-201ENST00000607459 531 ntBASIC9.52□□□□□ -0.89
UBR4Q5T4S7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 AC007431.3-201ENST00000623221 587 ntBASIC9.52□□□□□ -0.89
UBR4Q5T4S7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC9.52□□□□□ -0.89
UBR4Q5T4S7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
UBR4Q5T4S7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms