Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 AC096633.1-201ENST00000422446 749 ntBASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 AL671277.1-201ENST00000429656 993 ntBASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RSPO4Q2I0M5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.02■□□□□ 0.31
RSPO4Q2I0M5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 FAM86C2P-203ENST00000528684 1004 ntBASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RSPO4Q2I0M5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 CYP51A1P2-201ENST00000419457 1499 ntBASIC17■□□□□ 0.31
RSPO4Q2I0M5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 AC002056.1-201ENST00000395613 760 ntBASIC17■□□□□ 0.31
RSPO4Q2I0M5 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 FAM58DP-201ENST00000428076 619 ntBASIC17■□□□□ 0.31
RSPO4Q2I0M5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 HILS1-202ENST00000545329 423 ntBASIC17■□□□□ 0.31
RSPO4Q2I0M5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 CU639417.3-201ENST00000624240 1404 ntBASIC17■□□□□ 0.31
RSPO4Q2I0M5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17■□□□□ 0.31
RSPO4Q2I0M5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RSPO4Q2I0M5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO4Q2I0M5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO4Q2I0M5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO4Q2I0M5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO4Q2I0M5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO4Q2I0M5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RSPO4Q2I0M5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO4Q2I0M5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.99■□□□□ 0.31
RSPO4Q2I0M5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RSPO4Q2I0M5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 908.8 ms