Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.8■■□□□ 1.08
SCN7AQ01118 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN7AQ01118 PI4KAP1-204ENST00000612579 1703 ntBASIC21.8■■□□□ 1.08
SCN7AQ01118 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN7AQ01118 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.79■■□□□ 1.08
SCN7AQ01118 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SCN7AQ01118 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.79■■□□□ 1.08
SCN7AQ01118 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN7AQ01118 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN7AQ01118 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN7AQ01118 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
SCN7AQ01118 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SCN7AQ01118 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
SCN7AQ01118 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.79■■□□□ 1.08
SCN7AQ01118 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 KRT18P32-201ENST00000424695 1287 ntBASIC21.79■■□□□ 1.08
SCN7AQ01118 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN7AQ01118 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
SCN7AQ01118 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN7AQ01118 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.79■■□□□ 1.08
SCN7AQ01118 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.78■■□□□ 1.08
SCN7AQ01118 BX323043.1-201ENST00000641006 1765 ntBASIC21.78■■□□□ 1.08
SCN7AQ01118 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.78■■□□□ 1.08
SCN7AQ01118 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.78■■□□□ 1.08
SCN7AQ01118 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.78■■□□□ 1.08
SCN7AQ01118 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.78■■□□□ 1.08
SCN7AQ01118 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.78■■□□□ 1.08
SCN7AQ01118 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.78■■□□□ 1.08
SCN7AQ01118 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.78■■□□□ 1.08
SCN7AQ01118 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SCN7AQ01118 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.78■■□□□ 1.08
SCN7AQ01118 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.78■■□□□ 1.08
SCN7AQ01118 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.78■■□□□ 1.08
SCN7AQ01118 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.78■■□□□ 1.08
SCN7AQ01118 AP000974.1-201ENST00000623909 2387 ntBASIC21.78■■□□□ 1.08
SCN7AQ01118 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN7AQ01118 REXO1L9P-201ENST00000604264 2108 ntBASIC21.78■■□□□ 1.08
SCN7AQ01118 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SCN7AQ01118 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SCN7AQ01118 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.77■■□□□ 1.08
SCN7AQ01118 Z92544.3-201ENST00000624747 417 ntBASIC21.77■■□□□ 1.08
SCN7AQ01118 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 AL020996.1-203ENST00000536896 2307 ntBASIC21.77■■□□□ 1.08
SCN7AQ01118 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCN7AQ01118 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN7AQ01118 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SCN7AQ01118 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.77■■□□□ 1.07
SCN7AQ01118 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SCN7AQ01118 KRT18P55-202ENST00000578578 1546 ntBASIC21.77■■□□□ 1.07
SCN7AQ01118 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCN7AQ01118 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.76■■□□□ 1.07
SCN7AQ01118 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.76■■□□□ 1.07
SCN7AQ01118 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SCN7AQ01118 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SCN7AQ01118 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SCN7AQ01118 TIMM8BP1-201ENST00000452384 211 ntBASIC21.76■■□□□ 1.07
SCN7AQ01118 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.76■■□□□ 1.07
SCN7AQ01118 KRT8P48-201ENST00000515599 1220 ntBASIC21.76■■□□□ 1.07
SCN7AQ01118 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.76■■□□□ 1.07
SCN7AQ01118 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCN7AQ01118 AL135744.1-201ENST00000565098 629 ntBASIC21.76■■□□□ 1.07
SCN7AQ01118 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.76■■□□□ 1.07
SCN7AQ01118 AC015911.4-201ENST00000588022 1070 ntBASIC21.76■■□□□ 1.07
SCN7AQ01118 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms