Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.55■□□□□ 0.4
NUBP1P53384 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NUBP1P53384 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.55■□□□□ 0.4
NUBP1P53384 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.55■□□□□ 0.4
NUBP1P53384 RN7SL692P-201ENST00000464677 288 ntBASIC17.55■□□□□ 0.4
NUBP1P53384 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.55■□□□□ 0.4
NUBP1P53384 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.55■□□□□ 0.4
NUBP1P53384 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.55■□□□□ 0.4
NUBP1P53384 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.55■□□□□ 0.4
NUBP1P53384 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NUBP1P53384 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NUBP1P53384 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NUBP1P53384 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NUBP1P53384 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.55■□□□□ 0.4
NUBP1P53384 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.55■□□□□ 0.4
NUBP1P53384 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.55■□□□□ 0.4
NUBP1P53384 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.55■□□□□ 0.4
NUBP1P53384 FO538757.1-201ENST00000623083 1397 ntBASIC17.54■□□□□ 0.4
NUBP1P53384 AC148477.5-201ENST00000625164 1645 ntBASIC17.54■□□□□ 0.4
NUBP1P53384 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NUBP1P53384 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NUBP1P53384 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.54■□□□□ 0.4
NUBP1P53384 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.54■□□□□ 0.4
NUBP1P53384 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NUBP1P53384 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NUBP1P53384 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.54■□□□□ 0.4
NUBP1P53384 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC17.54■□□□□ 0.4
NUBP1P53384 GPR53P-205ENST00000457298 1084 ntBASIC17.54■□□□□ 0.4
NUBP1P53384 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.54■□□□□ 0.4
NUBP1P53384 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.54■□□□□ 0.4
NUBP1P53384 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.54■□□□□ 0.4
NUBP1P53384 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.54■□□□□ 0.4
NUBP1P53384 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.54■□□□□ 0.4
NUBP1P53384 AC020910.4-201ENST00000612269 540 ntBASIC17.54■□□□□ 0.4
NUBP1P53384 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NUBP1P53384 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NUBP1P53384 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NUBP1P53384 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.54■□□□□ 0.4
NUBP1P53384 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NUBP1P53384 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NUBP1P53384 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
NUBP1P53384 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NUBP1P53384 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
NUBP1P53384 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 AL049757.1-201ENST00000616842 1596 ntBASIC17.53■□□□□ 0.4
NUBP1P53384 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.53■□□□□ 0.4
NUBP1P53384 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NUBP1P53384 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NUBP1P53384 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NUBP1P53384 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.53■□□□□ 0.4
NUBP1P53384 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC17.53■□□□□ 0.4
NUBP1P53384 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NUBP1P53384 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 AL353718.1-201ENST00000451028 517 ntBASIC17.53■□□□□ 0.4
NUBP1P53384 RNU6-775P-201ENST00000459318 96 ntBASIC17.53■□□□□ 0.4
NUBP1P53384 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC17.53■□□□□ 0.4
NUBP1P53384 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.53■□□□□ 0.4
NUBP1P53384 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.53■□□□□ 0.4
NUBP1P53384 IGHV3-42-201ENST00000520410 361 ntBASIC17.53■□□□□ 0.4
NUBP1P53384 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC17.53■□□□□ 0.4
NUBP1P53384 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.53■□□□□ 0.4
NUBP1P53384 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.53■□□□□ 0.4
NUBP1P53384 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NUBP1P53384 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NUBP1P53384 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NUBP1P53384 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.53■□□□□ 0.4
NUBP1P53384 AL390754.1-201ENST00000619088 582 ntBASIC17.53■□□□□ 0.4
NUBP1P53384 AC080188.3-201ENST00000624842 748 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms