Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TM4SF4P48230 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.99■□□□□ 0.79
TM4SF4P48230 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF4P48230 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TM4SF4P48230 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF4P48230 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF4P48230 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF4P48230 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF4P48230 CLDN5-201ENST00000403084 2357 ntBASIC19.98■□□□□ 0.79
TM4SF4P48230 MYCLP1-201ENST00000372451 1075 ntBASIC19.98■□□□□ 0.79
TM4SF4P48230 AC002558.1-201ENST00000488906 803 ntBASIC19.98■□□□□ 0.79
TM4SF4P48230 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.98■□□□□ 0.79
TM4SF4P48230 SERBP1P5-201ENST00000510079 1181 ntBASIC19.98■□□□□ 0.79
TM4SF4P48230 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.98■□□□□ 0.79
TM4SF4P48230 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.98■□□□□ 0.79
TM4SF4P48230 AC069120.2-201ENST00000524091 540 ntBASIC19.98■□□□□ 0.79
TM4SF4P48230 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
TM4SF4P48230 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.98■□□□□ 0.79
TM4SF4P48230 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.98■□□□□ 0.79
TM4SF4P48230 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.98■□□□□ 0.79
TM4SF4P48230 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.98■□□□□ 0.79
TM4SF4P48230 KRT8P23-201ENST00000560090 1207 ntBASIC19.98■□□□□ 0.79
TM4SF4P48230 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TM4SF4P48230 AC116407.2-201ENST00000613639 860 ntBASIC19.98■□□□□ 0.79
TM4SF4P48230 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.98■□□□□ 0.79
TM4SF4P48230 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.98■□□□□ 0.79
TM4SF4P48230 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF4P48230 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF4P48230 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF4P48230 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.97■□□□□ 0.79
TM4SF4P48230 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
TM4SF4P48230 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
TM4SF4P48230 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.97■□□□□ 0.79
TM4SF4P48230 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TM4SF4P48230 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.97■□□□□ 0.79
TM4SF4P48230 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TM4SF4P48230 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF4P48230 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
TM4SF4P48230 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.97■□□□□ 0.79
TM4SF4P48230 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF4P48230 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.97■□□□□ 0.79
TM4SF4P48230 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF4P48230 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF4P48230 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF4P48230 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF4P48230 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.96■□□□□ 0.79
TM4SF4P48230 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.96■□□□□ 0.79
TM4SF4P48230 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF4P48230 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM4SF4P48230 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.96■□□□□ 0.79
TM4SF4P48230 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
TM4SF4P48230 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.95■□□□□ 0.78
TM4SF4P48230 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.95■□□□□ 0.78
TM4SF4P48230 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TM4SF4P48230 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 AC092580.3-201ENST00000430932 139 ntBASIC19.95■□□□□ 0.78
TM4SF4P48230 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.95■□□□□ 0.78
TM4SF4P48230 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.95■□□□□ 0.78
TM4SF4P48230 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 RN7SL692P-201ENST00000464677 288 ntBASIC19.95■□□□□ 0.78
TM4SF4P48230 AC004890.2-204ENST00000481968 304 ntBASIC19.95■□□□□ 0.78
TM4SF4P48230 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.95■□□□□ 0.78
TM4SF4P48230 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.95■□□□□ 0.78
TM4SF4P48230 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.95■□□□□ 0.78
TM4SF4P48230 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TM4SF4P48230 AL161645.1-201ENST00000622716 1255 ntBASIC19.95■□□□□ 0.78
TM4SF4P48230 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TM4SF4P48230 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.95■□□□□ 0.78
TM4SF4P48230 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.95■□□□□ 0.78
TM4SF4P48230 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.95■□□□□ 0.78
TM4SF4P48230 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.95■□□□□ 0.78
TM4SF4P48230 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM4SF4P48230 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM4SF4P48230 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.94■□□□□ 0.78
TM4SF4P48230 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms