Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.9■□□□□ 0.46
HADHAP40939 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
HADHAP40939 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HADHAP40939 MTCL1P1-201ENST00000446207 792 ntBASIC17.9■□□□□ 0.46
HADHAP40939 AC068472.1-201ENST00000474589 881 ntBASIC17.9■□□□□ 0.46
HADHAP40939 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.9■□□□□ 0.46
HADHAP40939 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 AC112698.1-201ENST00000510299 916 ntBASIC17.9■□□□□ 0.46
HADHAP40939 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 AC090616.6-201ENST00000582640 721 ntBASIC17.9■□□□□ 0.46
HADHAP40939 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.9■□□□□ 0.46
HADHAP40939 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HADHAP40939 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.9■□□□□ 0.46
HADHAP40939 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 AL355312.1-201ENST00000407115 2176 ntBASIC17.9■□□□□ 0.46
HADHAP40939 AC139713.2-201ENST00000641328 2723 ntBASIC17.9■□□□□ 0.46
HADHAP40939 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HADHAP40939 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
HADHAP40939 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.89■□□□□ 0.46
HADHAP40939 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.89■□□□□ 0.46
HADHAP40939 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHAP40939 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHAP40939 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
HADHAP40939 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHAP40939 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHAP40939 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHAP40939 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.89■□□□□ 0.45
HADHAP40939 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.89■□□□□ 0.45
HADHAP40939 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHAP40939 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHAP40939 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHAP40939 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HADHAP40939 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
HADHAP40939 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHAP40939 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HADHAP40939 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHAP40939 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 AC100803.2-201ENST00000562459 1963 ntBASIC17.89■□□□□ 0.45
HADHAP40939 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHAP40939 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.89■□□□□ 0.45
HADHAP40939 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.89■□□□□ 0.45
HADHAP40939 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HADHAP40939 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HADHAP40939 FZD10-202ENST00000539839 3282 ntBASIC17.89■□□□□ 0.45
HADHAP40939 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HADHAP40939 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
HADHAP40939 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
HADHAP40939 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 PCED1CP-201ENST00000419887 785 ntBASIC17.88■□□□□ 0.45
HADHAP40939 BX276092.5-203ENST00000456199 560 ntBASIC17.88■□□□□ 0.45
HADHAP40939 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.88■□□□□ 0.45
HADHAP40939 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 AC116407.4-201ENST00000623319 1061 ntBASIC17.88■□□□□ 0.45
HADHAP40939 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HADHAP40939 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.88■□□□□ 0.45
HADHAP40939 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.88■□□□□ 0.45
HADHAP40939 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HADHAP40939 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.87■□□□□ 0.45
HADHAP40939 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.87■□□□□ 0.45
HADHAP40939 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HADHAP40939 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms