Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CTNNA1P35221 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTNNA1P35221 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTNNA1P35221 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNNA1P35221 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
CTNNA1P35221 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CTNNA1P35221 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.69■□□□□ 0.58
CTNNA1P35221 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
CTNNA1P35221 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.69■□□□□ 0.58
CTNNA1P35221 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CTNNA1P35221 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CTNNA1P35221 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNNA1P35221 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.68■□□□□ 0.58
CTNNA1P35221 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.68■□□□□ 0.58
CTNNA1P35221 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.68■□□□□ 0.58
CTNNA1P35221 AC145285.6-201ENST00000604632 637 ntBASIC18.68■□□□□ 0.58
CTNNA1P35221 AC079602.3-201ENST00000623931 403 ntBASIC18.68■□□□□ 0.58
CTNNA1P35221 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNNA1P35221 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTNNA1P35221 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CTNNA1P35221 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNNA1P35221 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNNA1P35221 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.67■□□□□ 0.58
CTNNA1P35221 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.67■□□□□ 0.58
CTNNA1P35221 RASA4DP-201ENST00000460726 1199 ntBASIC18.67■□□□□ 0.58
CTNNA1P35221 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.67■□□□□ 0.58
CTNNA1P35221 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTNNA1P35221 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CTNNA1P35221 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNNA1P35221 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTNNA1P35221 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.67■□□□□ 0.58
CTNNA1P35221 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 AL118508.1-201ENST00000613502 2345 ntBASIC18.67■□□□□ 0.58
CTNNA1P35221 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTNNA1P35221 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CTNNA1P35221 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTNNA1P35221 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms