Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MIR7706-201ENST00000613747 67 ntBASIC15.23■□□□□ 0.03
CD40P25942 AC073592.4-201ENST00000623827 446 ntBASIC15.23■□□□□ 0.03
CD40P25942 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CD40P25942 AL022326.1-202ENST00000641533 845 ntBASIC15.23■□□□□ 0.03
CD40P25942 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.23■□□□□ 0.03
CD40P25942 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CD40P25942 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.23■□□□□ 0.03
CD40P25942 SIGLEC16-201ENST00000599858 1437 ntBASIC15.23■□□□□ 0.03
CD40P25942 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.23■□□□□ 0.03
CD40P25942 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.23■□□□□ 0.03
CD40P25942 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CD40P25942 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD40P25942 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.23■□□□□ 0.03
CD40P25942 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 RNF165-205ENST00000588679 2904 ntBASIC15.23■□□□□ 0.03
CD40P25942 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CD40P25942 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD40P25942 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.22■□□□□ 0.03
CD40P25942 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CD40P25942 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.22■□□□□ 0.03
CD40P25942 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.22■□□□□ 0.03
CD40P25942 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.22■□□□□ 0.03
CD40P25942 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.22■□□□□ 0.03
CD40P25942 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.22■□□□□ 0.03
CD40P25942 AC109462.3-201ENST00000573934 613 ntBASIC15.22■□□□□ 0.03
CD40P25942 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CD40P25942 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
CD40P25942 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.22■□□□□ 0.03
CD40P25942 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.22■□□□□ 0.03
CD40P25942 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.22■□□□□ 0.03
CD40P25942 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CD40P25942 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 AC243591.1-201ENST00000452967 1364 ntBASIC15.22■□□□□ 0.03
CD40P25942 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.22■□□□□ 0.03
CD40P25942 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.22■□□□□ 0.03
CD40P25942 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD40P25942 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD40P25942 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD40P25942 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CD40P25942 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD40P25942 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.21■□□□□ 0.03
CD40P25942 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD40P25942 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CD40P25942 HLA-J-201ENST00000462773 1622 ntBASIC15.21■□□□□ 0.03
CD40P25942 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CD40P25942 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.21■□□□□ 0.03
CD40P25942 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.21■□□□□ 0.03
CD40P25942 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD40P25942 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD40P25942 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CD40P25942 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.21■□□□□ 0.03
CD40P25942 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.21■□□□□ 0.03
CD40P25942 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.21■□□□□ 0.03
CD40P25942 IGHV3-52-201ENST00000519770 353 ntBASIC15.21■□□□□ 0.03
CD40P25942 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.21■□□□□ 0.03
CD40P25942 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.21■□□□□ 0.03
CD40P25942 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.21■□□□□ 0.03
CD40P25942 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CD40P25942 AC019129.2-201ENST00000609837 1235 ntBASIC15.21■□□□□ 0.03
CD40P25942 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.21■□□□□ 0.03
CD40P25942 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CD40P25942 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CD40P25942 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD40P25942 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD40P25942 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.21■□□□□ 0.03
CD40P25942 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.21■□□□□ 0.02
CD40P25942 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.21■□□□□ 0.02
CD40P25942 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CD40P25942 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CD40P25942 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.2■□□□□ 0.02
CD40P25942 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.2■□□□□ 0.02
CD40P25942 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CD40P25942 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD40P25942 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms