Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFRAP16234 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFRAP16234 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFRAP16234 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.55■□□□□ 0.56
PDGFRAP16234 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFRAP16234 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.55■□□□□ 0.56
PDGFRAP16234 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PDGFRAP16234 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.55■□□□□ 0.56
PDGFRAP16234 MIR3652-201ENST00000579335 131 ntBASIC18.55■□□□□ 0.56
PDGFRAP16234 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.55■□□□□ 0.56
PDGFRAP16234 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.55■□□□□ 0.56
PDGFRAP16234 AL138831.2-201ENST00000606564 490 ntBASIC18.55■□□□□ 0.56
PDGFRAP16234 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.55■□□□□ 0.56
PDGFRAP16234 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDGFRAP16234 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 HLA-J-201ENST00000462773 1622 ntBASIC18.55■□□□□ 0.56
PDGFRAP16234 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PDGFRAP16234 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFRAP16234 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
PDGFRAP16234 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFRAP16234 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFRAP16234 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFRAP16234 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFRAP16234 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
PDGFRAP16234 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.54■□□□□ 0.56
PDGFRAP16234 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFRAP16234 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
PDGFRAP16234 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFRAP16234 AC007967.3-201ENST00000434308 558 ntBASIC18.54■□□□□ 0.56
PDGFRAP16234 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.54■□□□□ 0.56
PDGFRAP16234 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.54■□□□□ 0.56
PDGFRAP16234 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.54■□□□□ 0.56
PDGFRAP16234 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFRAP16234 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFRAP16234 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.54■□□□□ 0.56
PDGFRAP16234 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.54■□□□□ 0.56
PDGFRAP16234 AP005901.3-202ENST00000581653 237 ntBASIC18.54■□□□□ 0.56
PDGFRAP16234 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PDGFRAP16234 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFRAP16234 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFRAP16234 AC233702.3-201ENST00000578656 1387 ntBASIC18.54■□□□□ 0.56
PDGFRAP16234 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFRAP16234 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFRAP16234 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFRAP16234 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PDGFRAP16234 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PDGFRAP16234 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PDGFRAP16234 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.53■□□□□ 0.56
PDGFRAP16234 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PDGFRAP16234 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.53■□□□□ 0.56
PDGFRAP16234 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.53■□□□□ 0.56
PDGFRAP16234 COX5BP2-201ENST00000392354 334 ntBASIC18.53■□□□□ 0.56
PDGFRAP16234 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.53■□□□□ 0.56
PDGFRAP16234 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 DUSP5P1-201ENST00000441325 1139 ntBASIC18.53■□□□□ 0.56
PDGFRAP16234 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.53■□□□□ 0.56
PDGFRAP16234 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.53■□□□□ 0.56
PDGFRAP16234 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.53■□□□□ 0.56
PDGFRAP16234 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.53■□□□□ 0.56
PDGFRAP16234 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.53■□□□□ 0.56
PDGFRAP16234 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.53■□□□□ 0.56
PDGFRAP16234 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFRAP16234 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.53■□□□□ 0.56
PDGFRAP16234 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.53■□□□□ 0.56
PDGFRAP16234 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PDGFRAP16234 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDGFRAP16234 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDGFRAP16234 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PDGFRAP16234 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms