Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
TOP2AP11388 DAD1-205ENST00000543337 501 ntTSL 3 BASIC30.59■■■□□ 2.49
TOP2AP11388 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC30.59■■■□□ 2.49
TOP2AP11388 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC30.59■■■□□ 2.49
TOP2AP11388 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC30.59■■■□□ 2.49
TOP2AP11388 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TOP2AP11388 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC30.59■■■□□ 2.49
TOP2AP11388 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC30.59■■■□□ 2.49
TOP2AP11388 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC30.59■■■□□ 2.49
TOP2AP11388 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
TOP2AP11388 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TOP2AP11388 AP000997.3-201ENST00000623333 2250 ntBASIC30.59■■■□□ 2.49
TOP2AP11388 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TOP2AP11388 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TOP2AP11388 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC30.59■■■□□ 2.49
TOP2AP11388 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
TOP2AP11388 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TOP2AP11388 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TOP2AP11388 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TOP2AP11388 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TOP2AP11388 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC30.58■■■□□ 2.49
TOP2AP11388 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC30.58■■■□□ 2.49
TOP2AP11388 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC30.58■■■□□ 2.49
TOP2AP11388 Z92544.3-201ENST00000624747 417 ntBASIC30.58■■■□□ 2.49
TOP2AP11388 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
TOP2AP11388 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TOP2AP11388 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
TOP2AP11388 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TOP2AP11388 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TOP2AP11388 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TOP2AP11388 GPS2P2-201ENST00000430745 888 ntBASIC30.57■■■□□ 2.49
TOP2AP11388 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC30.57■■■□□ 2.49
TOP2AP11388 TIMM8BP1-201ENST00000452384 211 ntBASIC30.57■■■□□ 2.49
TOP2AP11388 GREM1-201ENST00000560677 623 ntTSL 4 BASIC30.57■■■□□ 2.49
TOP2AP11388 INO80E-210ENST00000567705 880 ntTSL 3 BASIC30.57■■■□□ 2.49
TOP2AP11388 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.49
TOP2AP11388 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.49
TOP2AP11388 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
TOP2AP11388 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
TOP2AP11388 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TOP2AP11388 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC30.57■■■□□ 2.48
TOP2AP11388 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC30.57■■■□□ 2.48
TOP2AP11388 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC30.57■■■□□ 2.48
TOP2AP11388 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
TOP2AP11388 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC30.57■■■□□ 2.48
TOP2AP11388 COX20P2-201ENST00000452636 358 ntBASIC30.57■■■□□ 2.48
TOP2AP11388 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC30.57■■■□□ 2.48
TOP2AP11388 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
TOP2AP11388 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC30.57■■■□□ 2.48
TOP2AP11388 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
TOP2AP11388 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
TOP2AP11388 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
TOP2AP11388 HARS-203ENST00000431330 1774 ntTSL 2 BASIC30.56■■■□□ 2.48
TOP2AP11388 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC30.56■■■□□ 2.48
TOP2AP11388 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
TOP2AP11388 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC30.56■■■□□ 2.48
TOP2AP11388 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
TOP2AP11388 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
TOP2AP11388 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC30.56■■■□□ 2.48
TOP2AP11388 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC30.56■■■□□ 2.48
TOP2AP11388 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.56■■■□□ 2.48
TOP2AP11388 AC051619.7-201ENST00000568314 623 ntBASIC30.56■■■□□ 2.48
TOP2AP11388 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
TOP2AP11388 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC30.56■■■□□ 2.48
TOP2AP11388 BSG-215ENST00000618006 1329 ntTSL 2 BASIC30.56■■■□□ 2.48
TOP2AP11388 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC30.56■■■□□ 2.48
TOP2AP11388 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TOP2AP11388 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC30.55■■■□□ 2.48
TOP2AP11388 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC30.55■■■□□ 2.48
TOP2AP11388 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
TOP2AP11388 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TOP2AP11388 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC30.55■■■□□ 2.48
TOP2AP11388 FAM86GP-201ENST00000448322 971 ntBASIC30.55■■■□□ 2.48
TOP2AP11388 CCDC74BP1-201ENST00000508880 1123 ntBASIC30.55■■■□□ 2.48
TOP2AP11388 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
TOP2AP11388 REXO1L9P-201ENST00000604264 2108 ntBASIC30.55■■■□□ 2.48
TOP2AP11388 AC026120.1-201ENST00000611536 926 ntBASIC30.55■■■□□ 2.48
TOP2AP11388 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
TOP2AP11388 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
TOP2AP11388 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC30.55■■■□□ 2.48
TOP2AP11388 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC30.55■■■□□ 2.48
TOP2AP11388 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TOP2AP11388 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
TOP2AP11388 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TOP2AP11388 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC30.54■■■□□ 2.48
TOP2AP11388 CD99-202ENST00000381180 530 ntTSL 2 BASIC30.54■■■□□ 2.48
TOP2AP11388 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC30.54■■■□□ 2.48
TOP2AP11388 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC30.54■■■□□ 2.48
TOP2AP11388 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
TOP2AP11388 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC30.54■■■□□ 2.48
TOP2AP11388 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
TOP2AP11388 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TOP2AP11388 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TOP2AP11388 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TOP2AP11388 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC30.53■■■□□ 2.48
TOP2AP11388 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TOP2AP11388 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TOP2AP11388 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TOP2AP11388 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TOP2AP11388 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms