Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 BX005266.1-201ENST00000473402 457 ntBASIC13.82□□□□□ -0.2
CD28P10747 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.82□□□□□ -0.2
CD28P10747 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.82□□□□□ -0.2
CD28P10747 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 AP000867.4-201ENST00000641616 219 ntBASIC13.82□□□□□ -0.2
CD28P10747 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CD28P10747 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.82□□□□□ -0.2
CD28P10747 AC010460.3-201ENST00000511359 1579 ntBASIC13.82□□□□□ -0.2
CD28P10747 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 KRT8P47-201ENST00000604727 1398 ntBASIC13.82□□□□□ -0.2
CD28P10747 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CD28P10747 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD28P10747 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.81□□□□□ -0.2
CD28P10747 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.81□□□□□ -0.2
CD28P10747 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.81□□□□□ -0.2
CD28P10747 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.81□□□□□ -0.2
CD28P10747 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD28P10747 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.81□□□□□ -0.2
CD28P10747 IGHV3-22-201ENST00000520721 359 ntBASIC13.81□□□□□ -0.2
CD28P10747 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.81□□□□□ -0.2
CD28P10747 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.81□□□□□ -0.2
CD28P10747 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.81□□□□□ -0.2
CD28P10747 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.81□□□□□ -0.2
CD28P10747 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.81□□□□□ -0.2
CD28P10747 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 AC139530.3-201ENST00000620344 690 ntBASIC13.81□□□□□ -0.2
CD28P10747 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD28P10747 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD28P10747 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD28P10747 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD28P10747 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD28P10747 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD28P10747 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.8□□□□□ -0.2
CD28P10747 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CD28P10747 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD28P10747 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD28P10747 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CD28P10747 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 AC096633.1-201ENST00000422446 749 ntBASIC13.8□□□□□ -0.2
CD28P10747 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.8□□□□□ -0.2
CD28P10747 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.8□□□□□ -0.2
CD28P10747 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.8□□□□□ -0.2
CD28P10747 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.8□□□□□ -0.2
CD28P10747 AC008735.5-201ENST00000623544 497 ntBASIC13.8□□□□□ -0.2
CD28P10747 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 NEFHP1-201ENST00000412845 2629 ntBASIC13.8□□□□□ -0.2
CD28P10747 AC022898.2-201ENST00000616822 1312 ntBASIC13.8□□□□□ -0.2
CD28P10747 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 AC073592.3-201ENST00000625118 1834 ntBASIC13.8□□□□□ -0.2
CD28P10747 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD28P10747 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms