Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RB1P06400 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RB1P06400 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.58■□□□□ 0.57
RB1P06400 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RB1P06400 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RB1P06400 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RB1P06400 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RB1P06400 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.58■□□□□ 0.57
RB1P06400 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.58■□□□□ 0.57
RB1P06400 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RB1P06400 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RB1P06400 MYCLP1-201ENST00000372451 1075 ntBASIC18.58■□□□□ 0.56
RB1P06400 AC092474.2-201ENST00000424288 719 ntBASIC18.58■□□□□ 0.56
RB1P06400 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.58■□□□□ 0.56
RB1P06400 AC244107.1-201ENST00000442033 332 ntBASIC18.58■□□□□ 0.56
RB1P06400 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.58■□□□□ 0.56
RB1P06400 AC023141.5-201ENST00000458585 616 ntBASIC18.58■□□□□ 0.56
RB1P06400 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RB1P06400 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RB1P06400 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.58■□□□□ 0.56
RB1P06400 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.58■□□□□ 0.56
RB1P06400 AC022145.2-201ENST00000598203 171 ntBASIC18.58■□□□□ 0.56
RB1P06400 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RB1P06400 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RB1P06400 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RB1P06400 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RB1P06400 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RB1P06400 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RB1P06400 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RB1P06400 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RB1P06400 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.58■□□□□ 0.56
RB1P06400 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
RB1P06400 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RB1P06400 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RB1P06400 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RB1P06400 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.57■□□□□ 0.56
RB1P06400 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.57■□□□□ 0.56
RB1P06400 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.57■□□□□ 0.56
RB1P06400 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.57■□□□□ 0.56
RB1P06400 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 FAM185BP-201ENST00000443595 716 ntBASIC18.57■□□□□ 0.56
RB1P06400 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.57■□□□□ 0.56
RB1P06400 AC002558.1-201ENST00000488906 803 ntBASIC18.57■□□□□ 0.56
RB1P06400 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RB1P06400 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.57■□□□□ 0.56
RB1P06400 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RB1P06400 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 AC126763.1-201ENST00000552015 2118 ntBASIC18.56■□□□□ 0.56
RB1P06400 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.56■□□□□ 0.56
RB1P06400 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RB1P06400 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.56■□□□□ 0.56
RB1P06400 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.56■□□□□ 0.56
RB1P06400 AC112191.1-201ENST00000523689 701 ntBASIC18.56■□□□□ 0.56
RB1P06400 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 AC015911.4-201ENST00000588022 1070 ntBASIC18.56■□□□□ 0.56
RB1P06400 LINC00628-201ENST00000628516 1289 ntBASIC18.56■□□□□ 0.56
RB1P06400 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.56■□□□□ 0.56
RB1P06400 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.56■□□□□ 0.56
RB1P06400 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RB1P06400 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RB1P06400 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RB1P06400 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 AL031598.1-201ENST00000561511 1773 ntBASIC18.55■□□□□ 0.56
RB1P06400 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RB1P06400 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 ACTG1P4-201ENST00000425123 1122 ntBASIC18.55■□□□□ 0.56
RB1P06400 AC109322.1-201ENST00000524499 1264 ntBASIC18.55■□□□□ 0.56
RB1P06400 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.55■□□□□ 0.56
RB1P06400 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.55■□□□□ 0.56
RB1P06400 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.55■□□□□ 0.56
RB1P06400 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.55■□□□□ 0.56
RB1P06400 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RB1P06400 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RB1P06400 AC073592.3-201ENST00000625118 1834 ntBASIC18.55■□□□□ 0.56
RB1P06400 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms