Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 KRT8P7-201ENST00000533003 1432 ntBASIC16.7■□□□□ 0.26
MT-ND1P03886 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.7■□□□□ 0.26
MT-ND1P03886 HLA-J-201ENST00000462773 1622 ntBASIC16.7■□□□□ 0.26
MT-ND1P03886 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MT-ND1P03886 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND1P03886 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
MT-ND1P03886 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
MT-ND1P03886 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.7■□□□□ 0.26
MT-ND1P03886 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.7■□□□□ 0.26
MT-ND1P03886 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND1P03886 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND1P03886 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND1P03886 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.7■□□□□ 0.26
MT-ND1P03886 DUTP2-201ENST00000519164 463 ntBASIC16.7■□□□□ 0.26
MT-ND1P03886 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.7■□□□□ 0.26
MT-ND1P03886 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.7■□□□□ 0.26
MT-ND1P03886 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MT-ND1P03886 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
MT-ND1P03886 REXO1L11P-201ENST00000620964 1927 ntBASIC16.7■□□□□ 0.26
MT-ND1P03886 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND1P03886 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.7■□□□□ 0.26
MT-ND1P03886 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.7■□□□□ 0.26
MT-ND1P03886 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MT-ND1P03886 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.7■□□□□ 0.26
MT-ND1P03886 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.7■□□□□ 0.26
MT-ND1P03886 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MT-ND1P03886 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
MT-ND1P03886 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MT-ND1P03886 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 FLJ38576-201ENST00000623820 2459 ntBASIC16.69■□□□□ 0.26
MT-ND1P03886 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
MT-ND1P03886 AC009949.1-201ENST00000623048 1830 ntBASIC16.69■□□□□ 0.26
MT-ND1P03886 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.69■□□□□ 0.26
MT-ND1P03886 TSPY7P-201ENST00000431358 1114 ntBASIC16.69■□□□□ 0.26
MT-ND1P03886 CCR12P-201ENST00000446203 998 ntBASIC16.69■□□□□ 0.26
MT-ND1P03886 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
MT-ND1P03886 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.69■□□□□ 0.26
MT-ND1P03886 FITM1-202ENST00000559294 800 ntBASIC16.69■□□□□ 0.26
MT-ND1P03886 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.69■□□□□ 0.26
MT-ND1P03886 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.69■□□□□ 0.26
MT-ND1P03886 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.69■□□□□ 0.26
MT-ND1P03886 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MT-ND1P03886 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
MT-ND1P03886 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.69■□□□□ 0.26
MT-ND1P03886 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND1P03886 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MT-ND1P03886 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MT-ND1P03886 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
MT-ND1P03886 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MT-ND1P03886 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MT-ND1P03886 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MT-ND1P03886 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND1P03886 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MT-ND1P03886 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms