Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CLPTM1O96005 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.74■□□□□ 0.27
CLPTM1O96005 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.74■□□□□ 0.27
CLPTM1O96005 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CLPTM1O96005 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CLPTM1O96005 MIR718-201ENST00000390190 70 ntBASIC16.74■□□□□ 0.27
CLPTM1O96005 TSPY23P-201ENST00000440136 739 ntBASIC16.74■□□□□ 0.27
CLPTM1O96005 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.74■□□□□ 0.27
CLPTM1O96005 AF186192.3-201ENST00000583427 947 ntBASIC16.74■□□□□ 0.27
CLPTM1O96005 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.74■□□□□ 0.27
CLPTM1O96005 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.74■□□□□ 0.27
CLPTM1O96005 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.74■□□□□ 0.27
CLPTM1O96005 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.74■□□□□ 0.27
CLPTM1O96005 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLPTM1O96005 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 AC132872.4-202ENST00000622924 2756 ntBASIC16.73■□□□□ 0.27
CLPTM1O96005 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 AL135905.2-201ENST00000584934 1404 ntBASIC16.73■□□□□ 0.27
CLPTM1O96005 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLPTM1O96005 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 AC012618.2-201ENST00000428058 849 ntBASIC16.73■□□□□ 0.27
CLPTM1O96005 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.73■□□□□ 0.27
CLPTM1O96005 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.73■□□□□ 0.27
CLPTM1O96005 C1QL1P1-201ENST00000568105 661 ntBASIC16.73■□□□□ 0.27
CLPTM1O96005 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.73■□□□□ 0.27
CLPTM1O96005 AC233702.5-201ENST00000584107 538 ntBASIC16.73■□□□□ 0.27
CLPTM1O96005 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.73■□□□□ 0.27
CLPTM1O96005 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.73■□□□□ 0.27
CLPTM1O96005 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.73■□□□□ 0.27
CLPTM1O96005 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLPTM1O96005 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.72■□□□□ 0.27
CLPTM1O96005 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 AC133963.1-201ENST00000504166 1679 ntBASIC16.72■□□□□ 0.27
CLPTM1O96005 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 PKD1P5-201ENST00000532415 10291 ntBASIC16.72■□□□□ 0.27
CLPTM1O96005 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CLPTM1O96005 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 AL596275.1-201ENST00000423464 877 ntBASIC16.72■□□□□ 0.27
CLPTM1O96005 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.72■□□□□ 0.27
CLPTM1O96005 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 AP002982.1-201ENST00000492365 877 ntBASIC16.72■□□□□ 0.27
CLPTM1O96005 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.72■□□□□ 0.27
CLPTM1O96005 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 AL049637.2-201ENST00000641778 930 ntBASIC16.72■□□□□ 0.27
CLPTM1O96005 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CLPTM1O96005 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.72■□□□□ 0.27
CLPTM1O96005 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CLPTM1O96005 GMCL1P1-201ENST00000463439 1581 ntBASIC16.72■□□□□ 0.27
CLPTM1O96005 AC005052.1-201ENST00000625181 2492 ntBASIC16.72■□□□□ 0.27
CLPTM1O96005 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLPTM1O96005 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms