Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM3O75382 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRIM3O75382 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM3O75382 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRIM3O75382 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM3O75382 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM3O75382 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM3O75382 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM3O75382 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRIM3O75382 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM3O75382 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TRIM3O75382 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM3O75382 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRIM3O75382 AL139384.1-201ENST00000612143 3047 ntBASIC16.5■□□□□ 0.23
TRIM3O75382 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM3O75382 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 AC135776.1-201ENST00000319817 2481 ntBASIC16.5■□□□□ 0.23
TRIM3O75382 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM3O75382 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM3O75382 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM3O75382 TSPY12P-201ENST00000421279 868 ntBASIC16.5■□□□□ 0.23
TRIM3O75382 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRIM3O75382 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM3O75382 LINC00265-3P-201ENST00000447588 903 ntBASIC16.5■□□□□ 0.23
TRIM3O75382 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM3O75382 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.5■□□□□ 0.23
TRIM3O75382 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 MIR3652-201ENST00000579335 131 ntBASIC16.5■□□□□ 0.23
TRIM3O75382 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM3O75382 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM3O75382 LINC00167-201ENST00000530583 1419 ntBASIC16.5■□□□□ 0.23
TRIM3O75382 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM3O75382 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
TRIM3O75382 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRIM3O75382 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM3O75382 AC084018.2-201ENST00000613093 2607 ntBASIC16.49■□□□□ 0.23
TRIM3O75382 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM3O75382 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM3O75382 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 LINC00602-201ENST00000629776 2065 ntBASIC16.49■□□□□ 0.23
TRIM3O75382 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM3O75382 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM3O75382 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRIM3O75382 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 DUSP5P1-201ENST00000441325 1139 ntBASIC16.49■□□□□ 0.23
TRIM3O75382 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM3O75382 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM3O75382 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM3O75382 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM3O75382 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM3O75382 AL353801.3-201ENST00000609898 542 ntBASIC16.49■□□□□ 0.23
TRIM3O75382 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM3O75382 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TRIM3O75382 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM3O75382 AC233702.3-201ENST00000578656 1387 ntBASIC16.49■□□□□ 0.23
TRIM3O75382 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms