Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SH2D1AO60880 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SH2D1AO60880 PCDHB19P-201ENST00000570871 2371 ntBASIC13.24□□□□□ -0.29
SH2D1AO60880 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SH2D1AO60880 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SH2D1AO60880 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SH2D1AO60880 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SH2D1AO60880 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SH2D1AO60880 AC105020.1-201ENST00000435356 2205 ntBASIC13.24□□□□□ -0.29
SH2D1AO60880 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SH2D1AO60880 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.24□□□□□ -0.29
SH2D1AO60880 AGGF1P2-201ENST00000426656 2106 ntBASIC13.24□□□□□ -0.29
SH2D1AO60880 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.24□□□□□ -0.29
SH2D1AO60880 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SH2D1AO60880 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.24□□□□□ -0.29
SH2D1AO60880 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SH2D1AO60880 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.23□□□□□ -0.29
SH2D1AO60880 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SH2D1AO60880 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.23□□□□□ -0.29
SH2D1AO60880 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 TSPY17P-201ENST00000450329 467 ntBASIC13.23□□□□□ -0.29
SH2D1AO60880 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.23□□□□□ -0.29
SH2D1AO60880 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 AL023803.3-201ENST00000615559 522 ntBASIC13.23□□□□□ -0.29
SH2D1AO60880 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 AC060834.1-201ENST00000443027 2032 ntBASIC13.23□□□□□ -0.29
SH2D1AO60880 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SH2D1AO60880 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SH2D1AO60880 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SH2D1AO60880 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SH2D1AO60880 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.22□□□□□ -0.29
SH2D1AO60880 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.22□□□□□ -0.29
SH2D1AO60880 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.22□□□□□ -0.29
SH2D1AO60880 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.22□□□□□ -0.29
SH2D1AO60880 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 SLC25A1P2-201ENST00000430693 912 ntBASIC13.22□□□□□ -0.29
SH2D1AO60880 DDX43P3-201ENST00000441064 443 ntBASIC13.22□□□□□ -0.29
SH2D1AO60880 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.22□□□□□ -0.29
SH2D1AO60880 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SH2D1AO60880 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.22□□□□□ -0.29
SH2D1AO60880 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.22□□□□□ -0.29
SH2D1AO60880 AL353719.1-201ENST00000566847 864 ntBASIC13.22□□□□□ -0.29
SH2D1AO60880 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC13.22□□□□□ -0.29
SH2D1AO60880 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms