Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.13□□□□□ -0.47
NDUFA1O15239 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NDUFA1O15239 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NDUFA1O15239 AL162727.3-201ENST00000635661 2787 ntBASIC12.13□□□□□ -0.47
NDUFA1O15239 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NDUFA1O15239 LINC00304-203ENST00000565008 1864 ntBASIC12.12□□□□□ -0.47
NDUFA1O15239 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NDUFA1O15239 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NDUFA1O15239 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.12□□□□□ -0.47
NDUFA1O15239 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.12□□□□□ -0.47
NDUFA1O15239 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NDUFA1O15239 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.12□□□□□ -0.47
NDUFA1O15239 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.12□□□□□ -0.47
NDUFA1O15239 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.12□□□□□ -0.47
NDUFA1O15239 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.12□□□□□ -0.47
NDUFA1O15239 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
NDUFA1O15239 CRYGFP-201ENST00000418459 633 ntBASIC12.12□□□□□ -0.47
NDUFA1O15239 AGGF1P2-201ENST00000426656 2106 ntBASIC12.12□□□□□ -0.47
NDUFA1O15239 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.12□□□□□ -0.47
NDUFA1O15239 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.12□□□□□ -0.47
NDUFA1O15239 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.12□□□□□ -0.47
NDUFA1O15239 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.12□□□□□ -0.47
NDUFA1O15239 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NDUFA1O15239 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
NDUFA1O15239 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
NDUFA1O15239 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.12□□□□□ -0.47
NDUFA1O15239 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NDUFA1O15239 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
NDUFA1O15239 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
NDUFA1O15239 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NDUFA1O15239 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NDUFA1O15239 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
NDUFA1O15239 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 AC012618.2-201ENST00000428058 849 ntBASIC12.11□□□□□ -0.47
NDUFA1O15239 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.11□□□□□ -0.47
NDUFA1O15239 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFA1O15239 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFA1O15239 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.11□□□□□ -0.47
NDUFA1O15239 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NDUFA1O15239 AL163051.1-201ENST00000569214 1512 ntBASIC12.11□□□□□ -0.47
NDUFA1O15239 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NDUFA1O15239 KRT8P7-201ENST00000533003 1432 ntBASIC12.11□□□□□ -0.47
NDUFA1O15239 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NDUFA1O15239 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
NDUFA1O15239 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.1□□□□□ -0.47
NDUFA1O15239 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms