Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PRAMEF25A6NGN4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRAMEF25A6NGN4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 TSPY12P-201ENST00000421279 868 ntBASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 TSSC2-201ENST00000450217 709 ntBASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 AC093458.2-201ENST00000623150 629 ntBASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRAMEF25A6NGN4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 AC016734.2-201ENST00000624325 1377 ntBASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 CHCHD2P8-201ENST00000429873 447 ntBASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRAMEF25A6NGN4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 GUSBP12-201ENST00000513727 720 ntBASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 AC090616.6-201ENST00000582640 721 ntBASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 NKILA-202ENST00000614771 2598 ntBASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRAMEF25A6NGN4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms