Protein–RNA interactions for Protein: Q9Y6R1

SLC4A4, Electrogenic sodium bicarbonate cotransporter 1, humanhuman

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4Q9Y6R1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 AC148477.8-201ENST00000624298 468 ntBASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SLC4A4Q9Y6R1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 NKAPP1-205ENST00000585790 367 ntBASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 HCG11-201ENST00000411553 5696 ntBASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 AC006116.8-202ENST00000587620 1550 ntBASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC4A4Q9Y6R1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 AC132938.5-201ENST00000624980 1813 ntBASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 REXO1L11P-201ENST00000620964 1927 ntBASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 BCL2-203ENST00000589955 5011 ntBASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 KRT18P67-201ENST00000432816 1264 ntBASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 SLC25A6P5-201ENST00000435663 894 ntBASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 RNPS1P1-201ENST00000507437 918 ntBASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 AC079776.2-201ENST00000641154 1609 ntBASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC4A4Q9Y6R1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 AF186996.4-201ENST00000467186 377 ntBASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 BX005266.1-201ENST00000473402 457 ntBASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 AL662844.1-201ENST00000546340 181 ntBASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 AC021087.4-201ENST00000563761 564 ntBASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC4A4Q9Y6R1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms