Protein–RNA interactions for Protein: Q9Y4A5

TRRAP, Transformation/transcription domain-associated protein, humanhuman

Predictions only

Length 3,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAPQ9Y4A5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 AC010336.2-201ENST00000564226 506 ntBASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRRAPQ9Y4A5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 AP001059.3-201ENST00000619053 235 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 CNN2P2-201ENST00000443536 909 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 CNN2P3-201ENST00000450201 906 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 SPDYE22P-201ENST00000582158 798 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 AL136317.3-201ENST00000618497 906 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 AL096828.2-201ENST00000567259 1965 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 AC009949.1-201ENST00000623048 1830 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 ANO7L1-203ENST00000602586 1720 ntBASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRRAPQ9Y4A5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 FAM185BP-201ENST00000443595 716 ntBASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 AL132655.2-201ENST00000596276 594 ntBASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 AC107890.1-201ENST00000422478 521 ntBASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.29□□□□□ -0.28
TRRAPQ9Y4A5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms