Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FCF1Q9Y324 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FCF1Q9Y324 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
FCF1Q9Y324 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 AL355877.3-201ENST00000622820 899 ntBASIC17.93■□□□□ 0.46
FCF1Q9Y324 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FCF1Q9Y324 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
FCF1Q9Y324 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 RBM17P3-201ENST00000417687 1192 ntBASIC17.92■□□□□ 0.46
FCF1Q9Y324 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 FGFR3P6-201ENST00000457012 610 ntBASIC17.92■□□□□ 0.46
FCF1Q9Y324 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 AC009078.2-202ENST00000463353 338 ntBASIC17.92■□□□□ 0.46
FCF1Q9Y324 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 AL160237.2-201ENST00000556165 472 ntBASIC17.92■□□□□ 0.46
FCF1Q9Y324 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.92■□□□□ 0.46
FCF1Q9Y324 AP000867.4-201ENST00000641616 219 ntBASIC17.92■□□□□ 0.46
FCF1Q9Y324 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 AC008764.6-201ENST00000595909 2069 ntBASIC17.92■□□□□ 0.46
FCF1Q9Y324 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
FCF1Q9Y324 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
FCF1Q9Y324 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.91■□□□□ 0.46
FCF1Q9Y324 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FCF1Q9Y324 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FCF1Q9Y324 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FCF1Q9Y324 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.91■□□□□ 0.46
FCF1Q9Y324 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FCF1Q9Y324 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
FCF1Q9Y324 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FCF1Q9Y324 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
FCF1Q9Y324 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.91■□□□□ 0.46
FCF1Q9Y324 KRT8P10-201ENST00000450021 1447 ntBASIC17.91■□□□□ 0.46
FCF1Q9Y324 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
FCF1Q9Y324 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.91■□□□□ 0.46
FCF1Q9Y324 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
FCF1Q9Y324 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.91■□□□□ 0.46
FCF1Q9Y324 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms