Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SATB2Q9UPW6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SATB2Q9UPW6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 RBM17P3-201ENST00000417687 1192 ntBASIC17.33■□□□□ 0.36
SATB2Q9UPW6 HNRNPDP1-201ENST00000439535 754 ntBASIC17.33■□□□□ 0.36
SATB2Q9UPW6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 SCARNA2-201ENST00000458748 420 ntBASIC17.33■□□□□ 0.36
SATB2Q9UPW6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 KRT18P41-201ENST00000518924 1277 ntBASIC17.33■□□□□ 0.36
SATB2Q9UPW6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 AC009113.1-201ENST00000570267 2443 ntBASIC17.33■□□□□ 0.36
SATB2Q9UPW6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SATB2Q9UPW6 AC007613.1-201ENST00000572811 2597 ntBASIC17.33■□□□□ 0.36
SATB2Q9UPW6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.32■□□□□ 0.36
SATB2Q9UPW6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 RPS2P28-201ENST00000314255 741 ntBASIC17.32■□□□□ 0.36
SATB2Q9UPW6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 AC092183.1-201ENST00000469884 875 ntBASIC17.32■□□□□ 0.36
SATB2Q9UPW6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 AC113404.2-201ENST00000507884 177 ntBASIC17.32■□□□□ 0.36
SATB2Q9UPW6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 AC008687.5-201ENST00000593746 558 ntBASIC17.32■□□□□ 0.36
SATB2Q9UPW6 AC116407.3-201ENST00000623905 1129 ntBASIC17.32■□□□□ 0.36
SATB2Q9UPW6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SATB2Q9UPW6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms