Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 RNA5SP416-201ENST00000516838 111 ntBASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 Z83851.2-201ENST00000609564 659 ntBASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 HTR7P1-202ENST00000624664 4411 ntBASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC42EP3Q9UKI2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 RPS8P6-201ENST00000426177 609 ntBASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 AC092910.1-201ENST00000482027 1129 ntBASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 OR7E14P-202ENST00000530490 1290 ntBASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 AP001269.4-201ENST00000609611 512 ntBASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC42EP3Q9UKI2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC42EP3Q9UKI2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms