Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 GNAS-203ENST00000306120 1878 ntBASIC18.59■□□□□ 0.57
CHD7Q9P2D1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 KLF2P3-201ENST00000451977 1087 ntBASIC18.59■□□□□ 0.57
CHD7Q9P2D1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD7Q9P2D1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 SERBP1P5-201ENST00000510079 1181 ntBASIC18.58■□□□□ 0.57
CHD7Q9P2D1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 TUBB3P1-201ENST00000405796 1332 ntBASIC18.58■□□□□ 0.57
CHD7Q9P2D1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.58■□□□□ 0.57
CHD7Q9P2D1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 NME2P1-201ENST00000426182 414 ntBASIC18.58■□□□□ 0.56
CHD7Q9P2D1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD7Q9P2D1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 AL355306.1-201ENST00000415580 579 ntBASIC18.57■□□□□ 0.56
CHD7Q9P2D1 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 AC069335.1-201ENST00000489972 472 ntBASIC18.57■□□□□ 0.56
CHD7Q9P2D1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 AL596325.1-201ENST00000563991 1082 ntBASIC18.57■□□□□ 0.56
CHD7Q9P2D1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD7Q9P2D1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 CR383656.12-201ENST00000549567 513 ntBASIC18.56■□□□□ 0.56
CHD7Q9P2D1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms