Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 SLC25A6P5-201ENST00000435663 894 ntBASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 AP005117.1-201ENST00000584346 1413 ntBASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 REXO1L11P-201ENST00000620964 1927 ntBASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SPHK1Q9NYA1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 AL049757.1-201ENST00000616842 1596 ntBASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 FAAHP1-202ENST00000446499 1238 ntBASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 AC106795.1-205ENST00000512851 1056 ntBASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 AC104692.2-201ENST00000603054 253 ntBASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 AC008608.2-201ENST00000606089 416 ntBASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 AC019129.2-201ENST00000609837 1235 ntBASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 AL133373.2-201ENST00000623187 2828 ntBASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SPHK1Q9NYA1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 MTDHP3-201ENST00000594186 672 ntBASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 AL121912.1-201ENST00000603683 238 ntBASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 AD001527.2-201ENST00000622994 785 ntBASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 AP000867.4-201ENST00000641616 219 ntBASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.02■□□□□ 0.32
SPHK1Q9NYA1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 KRT8P10-201ENST00000450021 1447 ntBASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SPHK1Q9NYA1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.01■□□□□ 0.31
SPHK1Q9NYA1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms