Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 HLA-F-220ENST00000434407 884 ntBASIC16.52■□□□□ 0.24
RLIMQ9NVW2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RLIMQ9NVW2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RLIMQ9NVW2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RLIMQ9NVW2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RLIMQ9NVW2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.52■□□□□ 0.23
RLIMQ9NVW2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RLIMQ9NVW2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RLIMQ9NVW2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 AC006011.2-201ENST00000621313 1158 ntBASIC16.51■□□□□ 0.23
RLIMQ9NVW2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 AC009949.1-201ENST00000623048 1830 ntBASIC16.51■□□□□ 0.23
RLIMQ9NVW2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RLIMQ9NVW2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 KRT89P-201ENST00000620027 1478 ntBASIC16.5■□□□□ 0.23
RLIMQ9NVW2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 TSPY5P-201ENST00000426936 936 ntBASIC16.5■□□□□ 0.23
RLIMQ9NVW2 KRT18P38-201ENST00000449496 1282 ntBASIC16.5■□□□□ 0.23
RLIMQ9NVW2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 AC004263.2-201ENST00000617183 678 ntBASIC16.5■□□□□ 0.23
RLIMQ9NVW2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RLIMQ9NVW2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RLIMQ9NVW2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms