Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ECHDC1Q9NTX5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 PRELID1P1-202ENST00000567272 903 ntBASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 AC109462.3-201ENST00000573934 613 ntBASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 AC012313.10-201ENST00000623509 926 ntBASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 KRT8P10-201ENST00000450021 1447 ntBASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ECHDC1Q9NTX5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 TSPY19P-201ENST00000418461 509 ntBASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 TSPY18P-201ENST00000441642 509 ntBASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.52■■□□□ 1.04
ECHDC1Q9NTX5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.52■■□□□ 1.03
ECHDC1Q9NTX5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ECHDC1Q9NTX5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.52■■□□□ 1.03
ECHDC1Q9NTX5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ECHDC1Q9NTX5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
ECHDC1Q9NTX5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 AL591684.3-201ENST00000605187 298 ntBASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 AL121772.3-201ENST00000610840 674 ntBASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 AD001527.2-201ENST00000622994 785 ntBASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 AL353593.2-201ENST00000602529 1483 ntBASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ECHDC1Q9NTX5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ECHDC1Q9NTX5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms