Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 AC012615.1-201ENST00000565797 1299 ntBASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 AL691432.3-201ENST00000621860 400 ntBASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCGF1Q9BSM1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 AC233702.3-201ENST00000578656 1387 ntBASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 LINC00602-201ENST00000629776 2065 ntBASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 LINC01126-201ENST00000623515 1646 ntBASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 AC113404.2-201ENST00000507884 177 ntBASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 AL121894.2-201ENST00000602977 491 ntBASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCGF1Q9BSM1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 AC135776.1-201ENST00000319817 2481 ntBASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCGF1Q9BSM1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms