Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN18Q99952 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN18Q99952 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN18Q99952 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PTPN18Q99952 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN18Q99952 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN18Q99952 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN18Q99952 AC099522.2-201ENST00000607001 744 ntBASIC20.12■□□□□ 0.81
PTPN18Q99952 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN18Q99952 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN18Q99952 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN18Q99952 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN18Q99952 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN18Q99952 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN18Q99952 AC116562.4-201ENST00000641316 2276 ntBASIC20.12■□□□□ 0.81
PTPN18Q99952 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN18Q99952 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
PTPN18Q99952 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.11■□□□□ 0.81
PTPN18Q99952 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 GK-202ENST00000378941 458 ntTSL 3 BASIC20.11■□□□□ 0.81
PTPN18Q99952 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.11■□□□□ 0.81
PTPN18Q99952 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.11■□□□□ 0.81
PTPN18Q99952 AL355306.1-201ENST00000415580 579 ntBASIC20.11■□□□□ 0.81
PTPN18Q99952 FAM58DP-201ENST00000428076 619 ntBASIC20.11■□□□□ 0.81
PTPN18Q99952 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN18Q99952 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.11■□□□□ 0.81
PTPN18Q99952 AC005225.4-201ENST00000557330 545 ntBASIC20.11■□□□□ 0.81
PTPN18Q99952 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.11■□□□□ 0.81
PTPN18Q99952 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN18Q99952 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.11■□□□□ 0.81
PTPN18Q99952 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN18Q99952 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN18Q99952 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN18Q99952 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
PTPN18Q99952 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN18Q99952 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.1■□□□□ 0.81
PTPN18Q99952 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.1■□□□□ 0.81
PTPN18Q99952 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.1■□□□□ 0.81
PTPN18Q99952 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PTPN18Q99952 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.1■□□□□ 0.81
PTPN18Q99952 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN18Q99952 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 AL671277.1-201ENST00000429656 993 ntBASIC20.1■□□□□ 0.81
PTPN18Q99952 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN18Q99952 TSPY16P-201ENST00000449843 468 ntBASIC20.1■□□□□ 0.81
PTPN18Q99952 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.1■□□□□ 0.81
PTPN18Q99952 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.1■□□□□ 0.81
PTPN18Q99952 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN18Q99952 IGHV3-52-201ENST00000519770 353 ntBASIC20.1■□□□□ 0.81
PTPN18Q99952 AC087641.1-201ENST00000557561 1021 ntBASIC20.1■□□□□ 0.81
PTPN18Q99952 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN18Q99952 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN18Q99952 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PTPN18Q99952 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PTPN18Q99952 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.1■□□□□ 0.81
PTPN18Q99952 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN18Q99952 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PTPN18Q99952 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 AC009949.1-201ENST00000623048 1830 ntBASIC20.09■□□□□ 0.81
PTPN18Q99952 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PTPN18Q99952 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN18Q99952 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms