Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL13Q99616 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL13Q99616 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 AC134043.2-201ENST00000624206 2238 ntBASIC14.84□□□□□ -0.03
CCL13Q99616 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCL13Q99616 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCL13Q99616 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCL13Q99616 FZD10-202ENST00000539839 3282 ntBASIC14.84□□□□□ -0.03
CCL13Q99616 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL13Q99616 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL13Q99616 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CCL13Q99616 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL13Q99616 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CCL13Q99616 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL13Q99616 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL13Q99616 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL13Q99616 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CCL13Q99616 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCL13Q99616 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CCL13Q99616 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.83□□□□□ -0.03
CCL13Q99616 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCL13Q99616 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCL13Q99616 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCL13Q99616 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.83□□□□□ -0.04
CCL13Q99616 AC010460.3-201ENST00000511359 1579 ntBASIC14.83□□□□□ -0.04
CCL13Q99616 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CCL13Q99616 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL13Q99616 AC096633.1-201ENST00000422446 749 ntBASIC14.83□□□□□ -0.04
CCL13Q99616 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.83□□□□□ -0.04
CCL13Q99616 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCL13Q99616 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.83□□□□□ -0.04
CCL13Q99616 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.83□□□□□ -0.04
CCL13Q99616 AC096582.2-201ENST00000510860 516 ntBASIC14.83□□□□□ -0.04
CCL13Q99616 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.83□□□□□ -0.04
CCL13Q99616 AC138894.3-201ENST00000603787 634 ntBASIC14.83□□□□□ -0.04
CCL13Q99616 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.83□□□□□ -0.04
CCL13Q99616 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL13Q99616 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 AC097374.2-201ENST00000618617 1306 ntBASIC14.83□□□□□ -0.04
CCL13Q99616 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCL13Q99616 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL13Q99616 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL13Q99616 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCL13Q99616 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.83□□□□□ -0.04
CCL13Q99616 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 AC067852.2-201ENST00000590513 2313 ntBASIC14.82□□□□□ -0.04
CCL13Q99616 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL13Q99616 AC006116.8-202ENST00000587620 1550 ntBASIC14.82□□□□□ -0.04
CCL13Q99616 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCL13Q99616 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL13Q99616 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms