Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.76■□□□□ 0.27
COL21A1Q96P44 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COL21A1Q96P44 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 AL645929.1-201ENST00000420084 975 ntBASIC16.75■□□□□ 0.27
COL21A1Q96P44 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COL21A1Q96P44 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 AC100803.2-201ENST00000562459 1963 ntBASIC16.75■□□□□ 0.27
COL21A1Q96P44 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
COL21A1Q96P44 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 AC113404.2-201ENST00000507884 177 ntBASIC16.74■□□□□ 0.27
COL21A1Q96P44 FAM86EP-206ENST00000510506 987 ntBASIC16.74■□□□□ 0.27
COL21A1Q96P44 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.74■□□□□ 0.27
COL21A1Q96P44 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
COL21A1Q96P44 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms