Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SNX27Q96L92 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SNX27Q96L92 COX20P2-201ENST00000452636 358 ntBASIC19.06■□□□□ 0.64
SNX27Q96L92 BX005266.1-201ENST00000473402 457 ntBASIC19.06■□□□□ 0.64
SNX27Q96L92 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.06■□□□□ 0.64
SNX27Q96L92 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SNX27Q96L92 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.06■□□□□ 0.64
SNX27Q96L92 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.06■□□□□ 0.64
SNX27Q96L92 AC109462.3-201ENST00000573934 613 ntBASIC19.06■□□□□ 0.64
SNX27Q96L92 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX27Q96L92 FAM215A-202ENST00000632077 792 ntBASIC19.06■□□□□ 0.64
SNX27Q96L92 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SNX27Q96L92 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SNX27Q96L92 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.06■□□□□ 0.64
SNX27Q96L92 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SNX27Q96L92 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX27Q96L92 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.06■□□□□ 0.64
SNX27Q96L92 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNX27Q96L92 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SNX27Q96L92 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.05■□□□□ 0.64
SNX27Q96L92 IL9RP2-201ENST00000423948 1312 ntBASIC19.05■□□□□ 0.64
SNX27Q96L92 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SNX27Q96L92 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SNX27Q96L92 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX27Q96L92 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX27Q96L92 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNX27Q96L92 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.05■□□□□ 0.64
SNX27Q96L92 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX27Q96L92 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.05■□□□□ 0.64
SNX27Q96L92 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX27Q96L92 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX27Q96L92 AL049840.3-201ENST00000602669 611 ntBASIC19.05■□□□□ 0.64
SNX27Q96L92 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.05■□□□□ 0.64
SNX27Q96L92 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNX27Q96L92 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX27Q96L92 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX27Q96L92 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX27Q96L92 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SNX27Q96L92 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX27Q96L92 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
SNX27Q96L92 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.04■□□□□ 0.64
SNX27Q96L92 RPS2P1-201ENST00000434010 821 ntBASIC19.04■□□□□ 0.64
SNX27Q96L92 AC002558.1-201ENST00000488906 803 ntBASIC19.04■□□□□ 0.64
SNX27Q96L92 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX27Q96L92 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX27Q96L92 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SNX27Q96L92 MTDHP4-201ENST00000600287 670 ntBASIC19.04■□□□□ 0.64
SNX27Q96L92 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX27Q96L92 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNX27Q96L92 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX27Q96L92 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX27Q96L92 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX27Q96L92 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX27Q96L92 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX27Q96L92 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX27Q96L92 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX27Q96L92 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX27Q96L92 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX27Q96L92 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX27Q96L92 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX27Q96L92 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SNX27Q96L92 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX27Q96L92 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX27Q96L92 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SNX27Q96L92 KLF4P1-201ENST00000412782 1185 ntBASIC19.03■□□□□ 0.64
SNX27Q96L92 AC098831.1-202ENST00000438821 336 ntBASIC19.03■□□□□ 0.64
SNX27Q96L92 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms