Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.08■□□□□ 0.32
RNF31Q96EP0 AP001005.1-201ENST00000571755 1248 ntBASIC17.08■□□□□ 0.32
RNF31Q96EP0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF31Q96EP0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
RNF31Q96EP0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF31Q96EP0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF31Q96EP0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF31Q96EP0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF31Q96EP0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RNF31Q96EP0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
RNF31Q96EP0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF31Q96EP0 IL9RP2-201ENST00000423948 1312 ntBASIC17.07■□□□□ 0.32
RNF31Q96EP0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF31Q96EP0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
RNF31Q96EP0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 HNRNPDP1-201ENST00000439535 754 ntBASIC17.07■□□□□ 0.32
RNF31Q96EP0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF31Q96EP0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 AC106795.1-205ENST00000512851 1056 ntBASIC17.07■□□□□ 0.32
RNF31Q96EP0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF31Q96EP0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF31Q96EP0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF31Q96EP0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 AL031598.1-201ENST00000561511 1773 ntBASIC17.07■□□□□ 0.32
RNF31Q96EP0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF31Q96EP0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 GMCL1P1-201ENST00000463439 1581 ntBASIC17.06■□□□□ 0.32
RNF31Q96EP0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 AL031284.1-201ENST00000419297 478 ntBASIC17.06■□□□□ 0.32
RNF31Q96EP0 POM121L3P-201ENST00000419331 1163 ntBASIC17.06■□□□□ 0.32
RNF31Q96EP0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 AC113404.2-201ENST00000507884 177 ntBASIC17.06■□□□□ 0.32
RNF31Q96EP0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 AL662844.1-201ENST00000546340 181 ntBASIC17.06■□□□□ 0.32
RNF31Q96EP0 MIR7706-201ENST00000613747 67 ntBASIC17.06■□□□□ 0.32
RNF31Q96EP0 AL773604.1-201ENST00000617417 272 ntBASIC17.06■□□□□ 0.32
RNF31Q96EP0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 WIZP1-201ENST00000531444 2299 ntBASIC17.06■□□□□ 0.32
RNF31Q96EP0 AC099398.1-201ENST00000567919 2776 ntBASIC17.06■□□□□ 0.32
RNF31Q96EP0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF31Q96EP0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF31Q96EP0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms