Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 AC007967.2-201ENST00000432613 625 ntBASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 AC002558.1-201ENST00000488906 803 ntBASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 FAM197Y3-203ENST00000618346 717 ntBASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 AC009336.1-201ENST00000608941 1553 ntBASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SH3RF3Q8TEJ3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 REXO1L11P-201ENST00000620964 1927 ntBASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 KRT18P13-201ENST00000400056 1290 ntBASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 AC092865.5-201ENST00000545435 363 ntBASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 AL139424.1-201ENST00000607572 797 ntBASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 AC005593.1-201ENST00000624894 515 ntBASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3RF3Q8TEJ3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 NCF1C-201ENST00000438382 1427 ntBASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3RF3Q8TEJ3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.9■□□□□ 0.94
SH3RF3Q8TEJ3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms