Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNRC6AQ8NDV7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.03■□□□□ 0.16
TNRC6AQ8NDV7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
TNRC6AQ8NDV7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNRC6AQ8NDV7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNRC6AQ8NDV7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.03■□□□□ 0.16
TNRC6AQ8NDV7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TNRC6AQ8NDV7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TNRC6AQ8NDV7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 VN2R19P-201ENST00000442399 1052 ntBASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.02■□□□□ 0.16
TNRC6AQ8NDV7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 AL049757.1-201ENST00000616842 1596 ntBASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 ACTG1P4-201ENST00000425123 1122 ntBASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 AP002472.1-201ENST00000577490 586 ntBASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 AC068137.2-201ENST00000605408 478 ntBASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TNRC6AQ8NDV7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 RHOQP3-201ENST00000437982 621 ntBASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.01■□□□□ 0.15
TNRC6AQ8NDV7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TNRC6AQ8NDV7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16■□□□□ 0.15
TNRC6AQ8NDV7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TNRC6AQ8NDV7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TNRC6AQ8NDV7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TNRC6AQ8NDV7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TNRC6AQ8NDV7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16■□□□□ 0.15
TNRC6AQ8NDV7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms