Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC89Q8N998 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.39■□□□□ 0.53
CCDC89Q8N998 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC89Q8N998 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC89Q8N998 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 AC009949.1-201ENST00000623048 1830 ntBASIC18.38■□□□□ 0.53
CCDC89Q8N998 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 AC140113.3-201ENST00000605663 199 ntBASIC18.38■□□□□ 0.53
CCDC89Q8N998 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC89Q8N998 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC89Q8N998 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 AL596275.1-201ENST00000423464 877 ntBASIC18.37■□□□□ 0.53
CCDC89Q8N998 KRT18P65-201ENST00000439811 1286 ntBASIC18.37■□□□□ 0.53
CCDC89Q8N998 DDX43P3-201ENST00000441064 443 ntBASIC18.37■□□□□ 0.53
CCDC89Q8N998 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 AC145285.6-201ENST00000604632 637 ntBASIC18.37■□□□□ 0.53
CCDC89Q8N998 AL138966.2-201ENST00000621997 464 ntBASIC18.37■□□□□ 0.53
CCDC89Q8N998 AL023973.1-201ENST00000624619 620 ntBASIC18.37■□□□□ 0.53
CCDC89Q8N998 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC89Q8N998 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC89Q8N998 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 LIN28AP1-201ENST00000429574 405 ntBASIC18.36■□□□□ 0.53
CCDC89Q8N998 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 RASA4DP-201ENST00000460726 1199 ntBASIC18.36■□□□□ 0.53
CCDC89Q8N998 AC093827.2-201ENST00000512654 315 ntBASIC18.36■□□□□ 0.53
CCDC89Q8N998 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC89Q8N998 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CCDC89Q8N998 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms